I was working with a device that used Atmel SAMA5D3x MCU. Sometimes the devices needed to be re-flashed which required putting the MCU to programming mode. However, the device enclosure needed to be opened and also a jumper wire was needed to do this. Then I realized that it would be possible to enter the programming mode directly from Linux by manipulating boot sequence controller registers in the MCU. Writing a dedicated device driver for this seemed like an overkill so I wrote a simple utility application with mmap instead.